Browse of TCMCG006C66092 protein

CDS

Accession Number	TCMCG006C66092
gbkey	CDS
Protein Id	XP_013711677.1
Location	join(28579187..28579343,28579412..28579623,28580033..28580170,28580282..28580455,28580786..28580882,28581034..28581146,28581227..28581349,28581462..28581533,28581738..28581830,28582108..28582218,28582310..28582432,28582619..28582804,28582888..28582962,28583402..28583538,28583696..28583830,28583935..28584080,28584163..28584228,28584490..28584596,28584711..28584791,28584869..28584943,28585029..28585130,28585284..28585452,28585551..28585696,28585838..28585921,28585993..28586093,28586345..28586498,28586842..28586916,28587028..28587172,28588020..28588692,28588896..28588956,28589040..28589185,28589259..28589442,28589571..28589669,28589875..28590254,28590333..28590509,28590692..28590788,28590879..28591034,28591121..28591351,28591442..28591525,28591628..28591735)
Gene	LOC106415492
GeneID	106415492
Organism	Brassica napus

Protein

Length	1930aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013856223.2
Definition	rRNA biogenesis protein RRP5-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGGCTCCGTCAAAACTTCCAAGTGGAAAACGTAATGACTCCACTAAAGTATTCAAGTCCTCAAAGAAACCCTTCAAGAAGACGAAGGACGATGTTGCCGCAAGGTCTGAAGCCATGGCTCTCCAGCTCGAAGACGTTCCTGACTTTCCTCGAGGGGGAGGCACTTCTCTGAGCAAAACAGAGCGAAAGAAAATATACGAAGAGGTCGACGCTGAGTTTGAAGCCGAGGAGCGTGTTTCCAAGAGGAGTAAAGGAGGTAAACCTAATAAGAAGAGAAACCCTAGCGAGGTTGACGAATTGGGATCTCTTTTCGACGGTGGTTTAACTGGGAAACGGCCTAGATATGCCAATAAGATTACCATTAAGAATATCTCTCCGGGAATGAAGCTTCTGGGAGTTGTTACTGAAGTAAACCAGAAGGATATTGTAATTAGTCTTCCAGGGGGATTACGTGGATTAGTTCGCGCAAGCGAGGCCTTGGATTTTACGGATTTCGGAACTGAGGACGATGAAAATGAACTCCTTCGAGATATTTTTTCGGTGGGCCAGCTTGTTCCTTGCTTTGTATTGCAGTTAGATGATGATAAGAAGGAGGCGGGCAAAAGGAAAATATGGCTTTCGTTGCGGCTTTCTTTGTTGCACAAGGGATTCAGTTTGGATTCCTTTCAACCGGGAATGGTAGTCACTGCAAGCGTGAAAAGCGTGGAAGATCATGGTTATATCCTTCACTTTGGATTGCCTTCTATCACAGGATTTATCAAAAAAAGCAACGATGGAAATCAAGAGTTAAAGACTGGGCAACTTATTCAAGGCGTGGTTACAAATATTGATAAAGAACGGAAAATTGTTTCTCTTAGTGCGGACCCAGATTCAGTGGCGAAGTCTGTGACCAAGGATCTTAGTGGTATGTCGTTTGATCTTCTCATACCAGGCATGATGGTTAATGCCCGTGTGCAATCTGTCCTTGAGAATGGGATACTGTTAGGATTTCTTATGTACTTCACTGGAACGGTTGATCTATTCCATTTACAAAATCCAATGTGTAACAAGAGCTGGAAGGATGAATATACTCAGACTAAGATGGTCAATGCTAGAATATTGTTCATGGATCCATCAACTAGAGCTGTTGGTTTGACGTTTAACCCACATCTTGTTGGTAACAAGGCTCCTCCTTTGCATGTCTCTAGCGGAGACATATTTGATGAAGCAAAAGTTGTCCGTGTTGATAAATCAGGCCTTCTTCTTGAACTCCCTTCTAAGCCTGTTTCTACTCCAGCATATGTTAGCACATACGACGCAGCAGAAGATGAAGTAAAGAAACTGGAAAAGAATTTCAAGGAAGGAAACCGCATCCGTGTTCGAATCCTCGGCCTTAAGCATATGGAGGGGTTGGCCATAGGGACTTTAAAGGAAAGTGCTTTTGAAGGTCCAGCTTTCACCCACTCAGATGTCAAGCCTGGTATGGTGACGAAGGCAAAAATCATATCTGTTGATACATTTGGTGCCATTGTGCAATTTCCGGGTGGTTTGAAAGCAATGTGCCCACTTCAGCATATGTCTGAGTTTGAAGTTACGAAGCCCAGGAAAAAGTTCAAGGTTGGAGCTGAACTAATATTTCGGGTGCTTGGCTGCAAATCAAAGAGAATAACTGTTACATGCAAGAAAACACTTGTCAAGTCTAAACTTCCGATTTTGAGTTCTTACGCTGATGCAACTGAAGGACTAGTGACACATGGCTGGATAACAAAGATTGAAAAGCATGGATGCTTTGTTCGCTTCTATAATGGGGTGCAAGGATTTGTTGCCAGATTTGAACTTGGATTAGAGCCTGGAAGTGATCCCAGTTCAGTGTTTCATGTCGGGGAGGTTGTCAAATGCAGAGTAACCAGTGCGGTTCATGGTACTCGAAGGATCAACCTTAGCTTTATGATAAAACCAACAAGTGTTTCTGAAGACGATTCCATCAAGTTAGGTAGTATTGTATCTGGGGTAATTGATAGTATAACTCCTCAGGCAGTCACTGTCCATGTTAAATCCAAAGGTTTGCTGAAGGGAACAGTTTCTGCTGAACATTTAGCTGATCATCATGAGCAAGCAAAACTAATGATGTCACTTTTAAGACCTGGATTTGAGCTTGATAAGCTGCTGATAATAGACATTGACGGCAATAACTTGGCTCTCTCTTCAAAGTATTCTCTGATCAAGCTTGCTGAAGAGCTTCCTTCGGATATTAGTCAGCTGCAGCCAAACTCAGTGGTTCATGGTTATGTTTGTAACTTGATTGAAAATGGCTGCTTTGTCCGTTTTCTGGGTCGGTTGACTGGTTTCGCCCCTAGAAGCAAGGCAATTGACGAACCCAGGGCAGATCTGTCAGAATCCTTCTTTGTTGGACAATCGGTTCGGGCTAATATAGTTGATATCAATCAAGAAAAAAGCAGGATAACTCTTTCATTGAAACAGTCATCTTGTGCTTCTGTAGATGCTTCTTTTATCCAGGAGTACTTCCTTACGGATGAGAAGATCTCGGACCTGCAATCATCTGATATCACTGAAAGTGAATGTAGTTGGGTTGAGAAATTCTCTATTGGGAGTTTGGTCAAGGGAACCGTACATGAGCAAAATGAACTGGGTTTGGTGGTGAATTTTGACAATATTGATAACGTGCTTGGTTTTATACCTCAGTATCATTTGGGTGGAGCTACTTTAGAACACGGTTCTGTTGTCGAAGCAGTTGTTCTTGATTTATCTAGGGCAGAGAGACTAGTTGATTTGTCTTTGCGGCCTGAGCTCATAAACAACTCAACCAAAGAGGTGTCCAGCAACCAGTCCAAAAAGAAACGTAGAAGAGCTATTTCCAAGGAACTTGAAGTCCACCAAAGGGTCAGCGCTGTTGTAGAGATTGTGAAGGAGCAATACTTGATTTTGTCGATTCCAGAACATGGTTACACTATAGGATATGCGTCAATATCAGACTATAACACACAGAAGTTACCAGTGAAACAATTTTCAGCTGGACAAAGTGTTGTTGCGTCTGTGGAGGCTCTGCAAAACTCTTTGACGTCGGGGAGGTTGCTTCTACTTCTTGACTCTGTTTCGGGTATTTCTGATACACCCCATTCTAAGAGGACAAAGAATAAATCCAGTTGTGGGGTTGGTTCTGTTGTCCACGCCGAGATTACTGAAATAAAGCCTTTGGAAGTGAGAGTAAACTTTGGCCAAAGTTTCAAAGGAAGAATCCACATAACGGAGGTGGATGATGTAAGTACAAGTGAAGAACCTTTTTCCAAATTCAGAGTCGGGCAATCAGTGTCTGCAAGGGTTATTGCAAAGCCCTGGCATACTAATATCGAAAAGAGTCTTTGGGAGCTTTCTTCAAAGCCTGCAATACTTAGAGACTCCAGTGAATTGAATGGCATTCAAGTGAGGGAACAGCTTGAGTTTGTTACTGGAGAGCGTGTCAGGGGATATGTCTACAAAGTGGATAAAGAATGGGTTTGGCTGACAATATCTCGCAATGTGACGGCATGCGTGTTCATTTTAGACACTGGATGCGACGCTCAAGAACTTGAGGAGTTCGATAGGCGTTTTCCCATTGGTAAAGCTGTTTCAGGCTATGTTTTGACGTACGATAAAGAAAAGAAAACAGCACGGTTGGTTCAGCGTCCACTACTTGATATCCAGAAAAGCATTGCCAACGGTGGAGGCTGTAAAACGGATAATCTAGACAGTAGTATTCCTGGTGTTGATGCTACTCTATTCATTCATGAAGGAGACATTCTTGGTGGAAGAATTTCTAAGATACTTCCTGGTGTTGGTGGACTTCGTGTGCAAATAGGTTCTTACGTGTTTGGGAGAGTTCCTTACGTGGTTGGGAGAGTTCATTTTACTGAAATCAATGATTCATGGGTCTCCAATCCGTTAGATGGTTTTCATGAAGGTCAGTTTGTCAAGTGCAAGGTCTTGGAAATCAGCAATTCTAGTAAAGGGACTGTGCAAATTGAATTGTCGTTACGGACATCTCTAGATGGTATGACTTCTGACCAACTCTCAGAAGCTTCAAATGATAATGTCAATATATGCAAACGTTTTGAAAGGATTGAAGATCTTTCTCCTGATATGGCCATCCAGGGTTATGTCAAGAATACGATGTCAAAAGGTTGTTTTATTATGCTTTCAAGGAAACTCGACGCAAAAGTTTTATTGTCAAATTTAAGTGATACTTTTGTCAAGGATCCCGAAAAGGAGTTTCCAGTAGGGAAACTTGTAACTGGCAGGGTGTTAAATGTCGAGTCGTTATCCAAGCGGGTAGAAGTCACTCTGAAGAAAGGAAATGCGGGTGGGCAACCAAAATCTGAATCTTATGACTTGAAGCAATTCCATGTTGGAGACGTGATTTCGGGGAGCATCAAACGAGTGGAGCCCTATGGCTTATTCATTACAATAGACAACACGAGCATGGTTGGATTATGTCATAAATCACAGCTTTCTGATGATCGTATTGAGGATGTACAAGCCAGATATGAGGCTGGGGAAAGCGTCACCGCAAAGATTTTGAAGCTGGACGAGGAAAAGCAACGTATATCGCTTGGGATGAAGAGTTCTTATTTTATGAACGACGATGATGACAAGACACAGCCACCTTCTGATGAAAACGCTAAAGAAGACAGCATGGAATGTGATCCAGTCAATGATTCGAAGTCGGGAGTTCTTGCAGCAGTTGGTGATTTCGGGTTCCAGGAAACAGGCTATGAAAGACATAGTGGATCTTCTCTGGTTCTTTCCCAAGTTGAGTCAAGGGCTTCTATCCCTGCGCTTGAGGTTAACATTGACGACATTGAGGAGTCGGGCTTTGACAACGATCAGAATGAGAAACTACAGGGAGTCGACAAAGATGAAAAGAGCAAGAGAAGGGAAAAGCAAAAAGACAAAGAAGAAAGAGAGAGAAAAATACAAGCTGCTGAAGGAAGATTGCTGGAGAATCATGCTCCTGAGAGTGCTGATGAATTTGAGAAATTGGTTAGAAGCTCTCCAAATAGCAGCTTTGTCTGGATTAAGTATATGGCGTTCATGCTCAGTTTGGCTGATATTGAGAAAGCCAGGTCCATCGCTGAGAGGGCCTTGAGGACTATAAATATTCGTGAAGAAGATGAGAAGCTAAACATATGGGTTGCTTACTTCAATTTGGAAAATGAACATGGAAGTCCTCCAGAGGAAGCTGTTAAGAAAGTTTTTGAAAGAGCACGTCAATACTGTGACCCAAAGAAAGTTTACCACGCTCTCTTGGGCGTTTACGAGAGAACAGAGCAATATAAATTGGCTGATAAGCTGCTTGATGAGATGATCAAGAAGTTCAAGCAATCCTGCAAGGTTTGGTTAAGGAAAGTACAAAGTCATCTGAAGCAAGACGAGGACGACATTCAGTCTATCGTCAATCGTGCCTTGCTGTGTCTTCCGCGCCATAAGCACATTAAATTCATATCACAAACTGCTATTCTTGAGTTCAAATGCGGAGTTGCAGAGAGAGGGAGATCACTTTTTGAAGGCGTTCTTAGGGAATACCCAAAAAGAACAGACTTGTGGAGTGTTTATCTTGACCAGGAGATTCGATTGGGAGAAGTTGATGTGATTAGATCCTTGTTCGAGAGAGCCATTAGCTTGAGCTTGCCTCCTAAGAAGATGAAGTTTTTATTCAAGAAGTTCTTGGAATATGAGAAAACTGCTGGTGACGATGAGAGAGTCGAGTACGTGAAGCAAAGGGCAATGGAGTATGCCGACAGTACCTTGGCCTGA

Protein:   MVAPSKLPSGKRNDSTKVFKSSKKPFKKTKDDVAARSEAMALQLEDVPDFPRGGGTSLSKTERKKIYEEVDAEFEAEERVSKRSKGGKPNKKRNPSEVDELGSLFDGGLTGKRPRYANKITIKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEALDFTDFGTEDDENELLRDIFSVGQLVPCFVLQLDDDKKEAGKRKIWLSLRLSLLHKGFSLDSFQPGMVVTASVKSVEDHGYILHFGLPSITGFIKKSNDGNQELKTGQLIQGVVTNIDKERKIVSLSADPDSVAKSVTKDLSGMSFDLLIPGMMVNARVQSVLENGILLGFLMYFTGTVDLFHLQNPMCNKSWKDEYTQTKMVNARILFMDPSTRAVGLTFNPHLVGNKAPPLHVSSGDIFDEAKVVRVDKSGLLLELPSKPVSTPAYVSTYDAAEDEVKKLEKNFKEGNRIRVRILGLKHMEGLAIGTLKESAFEGPAFTHSDVKPGMVTKAKIISVDTFGAIVQFPGGLKAMCPLQHMSEFEVTKPRKKFKVGAELIFRVLGCKSKRITVTCKKTLVKSKLPILSSYADATEGLVTHGWITKIEKHGCFVRFYNGVQGFVARFELGLEPGSDPSSVFHVGEVVKCRVTSAVHGTRRINLSFMIKPTSVSEDDSIKLGSIVSGVIDSITPQAVTVHVKSKGLLKGTVSAEHLADHHEQAKLMMSLLRPGFELDKLLIIDIDGNNLALSSKYSLIKLAEELPSDISQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDEPRADLSESFFVGQSVRANIVDINQEKSRITLSLKQSSCASVDASFIQEYFLTDEKISDLQSSDITESECSWVEKFSIGSLVKGTVHEQNELGLVVNFDNIDNVLGFIPQYHLGGATLEHGSVVEAVVLDLSRAERLVDLSLRPELINNSTKEVSSNQSKKKRRRAISKELEVHQRVSAVVEIVKEQYLILSIPEHGYTIGYASISDYNTQKLPVKQFSAGQSVVASVEALQNSLTSGRLLLLLDSVSGISDTPHSKRTKNKSSCGVGSVVHAEITEIKPLEVRVNFGQSFKGRIHITEVDDVSTSEEPFSKFRVGQSVSARVIAKPWHTNIEKSLWELSSKPAILRDSSELNGIQVREQLEFVTGERVRGYVYKVDKEWVWLTISRNVTACVFILDTGCDAQELEEFDRRFPIGKAVSGYVLTYDKEKKTARLVQRPLLDIQKSIANGGGCKTDNLDSSIPGVDATLFIHEGDILGGRISKILPGVGGLRVQIGSYVFGRVPYVVGRVHFTEINDSWVSNPLDGFHEGQFVKCKVLEISNSSKGTVQIELSLRTSLDGMTSDQLSEASNDNVNICKRFERIEDLSPDMAIQGYVKNTMSKGCFIMLSRKLDAKVLLSNLSDTFVKDPEKEFPVGKLVTGRVLNVESLSKRVEVTLKKGNAGGQPKSESYDLKQFHVGDVISGSIKRVEPYGLFITIDNTSMVGLCHKSQLSDDRIEDVQARYEAGESVTAKILKLDEEKQRISLGMKSSYFMNDDDDKTQPPSDENAKEDSMECDPVNDSKSGVLAAVGDFGFQETGYERHSGSSLVLSQVESRASIPALEVNIDDIEESGFDNDQNEKLQGVDKDEKSKRREKQKDKEERERKIQAAEGRLLENHAPESADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEDEKLNIWVAYFNLENEHGSPPEEAVKKVFERARQYCDPKKVYHALLGVYERTEQYKLADKLLDEMIKKFKQSCKVWLRKVQSHLKQDEDDIQSIVNRALLCLPRHKHIKFISQTAILEFKCGVAERGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEVDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKTAGDDERVEYVKQRAMEYADSTLA